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The matrisome: in silico definition and in vivo characterization by proteomics of normal and tumor extracellular matrices. Naba, Alexandra; Clauser, Karl R; Hoersch, Sebastian; Liu, Hui; Carr, Steven A; Hynes, Richard O Mol Cell Proteomics 2012 PubMed Link
Expression of tumour-specific antigens underlies cancer immunoediting. DuPage, Michel; Mazumdar, Claire; Schmidt, Leah M; Cheung, Ann F; Jacks, Tyler Nature 2012 PubMed Link
CUB-domain-containing protein 1 (CDCP1) activates Src to promote melanoma metastasis. Liu, Hui; Ong, Shao-En; Badu-Nkansah, Kwabena; Schindler, Jeffrey; White, Forest M; Hynes, Richard O Proc Natl Acad Sci U S A 2011 PubMed Link
Dragon (repulsive guidance molecule b) inhibits IL-6 expression in macrophages. Xia, Yin; Cortez-Retamozo, Virna; Niederkofler, Vera; Salie, Rishard; Chen, Shanzhuo; Samad, Tarek A; Hong, Charles C; Arber, Silvia; Vyas, Jatin M; Weissleder, Ralph; Pittet, Mikael J; Lin, Herbert Y J Immunol 2011 PubMed Link
Intravital imaging. Pittet, Mikael J; Weissleder, Ralph Cell 2011 PubMed Link

89Zr-labeled dextran nanoparticles allow in vivo macrophage imaging.

Keliher, Edmund J; Yoo, Jeongsoo; Nahrendorf, Matthias; Lewis, Jason S; Marinelli, Brett; Newton, Andita; Pittet, Mikael J; Weissleder, Ralph Bioconjug Chem 2011 PubMed Link
Endogenous T cell responses to antigens expressed in lung adenocarcinomas delay malignant tumor progression. DuPage, Michel; Cheung, Ann F; Mazumdar, Claire; Winslow, Monte M; Bronson, Roderick; Schmidt, Leah M; Crowley, Denise; Chen, Jianzhu; Jacks, Tyler Cancer Cell 2011 PubMed Link
GPR56 Regulates VEGF production and angiogenesis during melanoma progression. Yang, Liquan; Chen, Guangchun; Mohanty, Sonali; Scott, Glynis; Fazal, Fabeha; Rahman, Arshad; Begum, Shahinoor; Hynes, Richard O; Xu, Lei Cancer Res 2011 PubMed Link
Counterbalancing angiogenic regulatory factors control the rate of cancer progression and survival in a stage-specific manner. Xie, Liang; Duncan, Michael B; Pahler, Jessica; Sugimoto, Hikaru; Martino, Margot; Lively, Julie; Mundel, Thomas; Soubasakos, Mary; Rubin, Kristofer; Takeda, Takaaki; Inoue, Masahiro; Lawler, Jack; Hynes, Richard O; Hanahan, Douglas; Kalluri, Raghu Proc Natl Acad Sci U S A 2011 PubMed Link
In vivo imaging in cancer. Condeelis, John; Weissleder, Ralph Cold Spring Harb Perspect Biol 2010 PubMed Link
GPR56 plays varying roles in endogenous cancer progression. Xu, Lei; Begum, Shahinoor; Barry, Marc; Crowley, Denise; Yang, Liquan; Bronson, Roderick T; Hynes, Richard O Clin Exp Metastasis 2010 PubMed Link
Hybrid PET-optical imaging using targeted probes. Nahrendorf, Matthias; Keliher, Edmund; Marinelli, Brett; Waterman, Peter; Feruglio, Paolo Fumene; Fexon, Lioubov; Pivovarov, Misha; Swirski, Filip K; Pittet, Mikael J; Vinegoni, Claudio; Weissleder, Ralph Proc Natl Acad Sci U S A 2010 PubMed Link
Cancer cell of origin: spotlight on luminal progenitors. Chaffer, Christine L; Weinberg, Robert A Cell Stem Cell 2010 PubMed Link
GPR56 is essential for testis development and male fertility in mice. Chen, Guangchun; Yang, Liquan; Begum, Shahinoor; Xu, Lei Dev Dyn 2010 PubMed Link
Identification of splenic reservoir monocytes and their deployment to inflammatory sites. Swirski, Filip K; Nahrendorf, Matthias; Etzrodt, Martin; Wildgruber, Moritz; Cortez-Retamozo, Virna; Panizzi, Peter; Figueiredo, Jose-Luiz; Kohler, Rainer H; Chudnovskiy, Aleksey; Waterman, Peter; Aikawa, Elena; Mempel, Thorsten R; Libby, Peter; Weissleder, Ralph; Pittet, Mikael J Science 2009 PubMed Link
Behavior of endogenous tumor-associated macrophages assessed in vivo using a functionalized nanoparticle. Leimgruber, Antoine; Berger, Cedric; Cortez-Retamozo, Virna; Etzrodt, Martin; Newton, Andita P; Waterman, Peter; Figueiredo, Jose Luiz; Kohler, Rainer H; Elpek, Natalie; Mempel, Thorsten R; Swirski, Filip K; Nahrendorf, Matthias; Weissleder, Ralph; Pittet, Mikael J Neoplasia 2009 PubMed Link
Behavior of immune players in the tumor microenvironment. Pittet, Mikael J Curr Opin Oncol 2009 PubMed Link
The metastatic niche: adapting the foreign soil. Psaila, Bethan; Lyden, David Nat Rev Cancer 2009 PubMed Link
High-yielding syntheses of hydrophilic conjugatable chlorins and bacteriochlorins. McCarthy, Jason R; Bhaumik, Jayeeta; Merbouh, Nabyl; Weissleder, Ralph Org Biomol Chem 2009 PubMed Link
Synthesis and photophysical properties of sulfonamidophenyl porphyrins as models for activatable photosensitizers. Bhaumik, Jayeeta; Weissleder, Ralph; McCarthy, Jason R J Org Chem 2009 PubMed Link
Engulfing tumors with synthetic extracellular matrices for cancer immunotherapy. Hori, Yuki; Stern, Patrick J; Hynes, Richard O; Irvine, Darrell J Biomaterials 2009 PubMed Link
Natural killer cells require selectins for suppression of subcutaneous tumors. Sobolev, Olga; Stern, Patrick; Lacy-Hulbert, Adam; Hynes, Richard O Cancer Res 2009 PubMed Link
Conditional mouse lung cancer models using adenoviral or lentiviral delivery of Cre recombinase. DuPage, Michel; Dooley, Alison L; Jacks, Tyler Nat Protoc 2009 PubMed Link
Multimodal nanoagents for the detection of intravascular thrombi. McCarthy, Jason R; Patel, Purvish; Botnaru, Ion; Haghayeghi, Pouneh; Weissleder, Ralph; Jaffer, Farouc A Bioconjug Chem 2009 PubMed Link
Transitions between epithelial and mesenchymal states: acquisition of malignant and stem cell traits. Polyak, Kornelia; Weinberg, Robert A Nat Rev Cancer 2009 PubMed Link
Integrated nanosensors to determine levels and functional activity of human telomerase. Perez, J Manuel; Grimm, Jan; Josephson, Lee; Weissleder, Ralph Neoplasia 2008 PubMed Link
Regulated expression of a tumor-associated antigen reveals multiple levels of T-cell tolerance in a mouse model of lung cancer. Cheung, Ann F; Dupage, Michel J P; Dong, H Katie; Chen, Jianzhu; Jacks, Tyler Cancer Res 2008 PubMed Link
A system for Cre-regulated RNA interference in vivo. Stern, Patrick; Astrof, Sophie; Erkeland, Stefan J; Schustak, Joshua; Sharp, Phillip A; Hynes, Richard O Proc Natl Acad Sci U S A 2008 PubMed Link
Simplified syntheses of complex multifunctional nanomaterials. Garanger, Elisabeth; Aikawa, Elena; Reynolds, Fred; Weissleder, Ralph; Josephson, Lee Chem Commun (Camb) 2008 PubMed Link
Multifunctional magnetic nanoparticles for targeted imaging and therapy. McCarthy, Jason R; Weissleder, Ralph Adv Drug Deliv Rev 2008 PubMed Link
A near-infrared cell tracker reagent for multiscopic in vivo imaging and quantification of leukocyte immune responses. Swirski, Filip K; Berger, Cedric R; Figueiredo, Jose-Luiz; Mempel, Thorsten R; von Andrian, Ulrich H; Pittet, Mikael J; Weissleder, Ralph PLoS One 2007 PubMed Link
Targeted delivery of multifunctional magnetic nanoparticles. McCarthy, Jason R; Kelly, Kimberly A; Sun, Eric Y; Weissleder, Ralph Nanomedicine (Lond) 2007 PubMed Link
PepBank--a database of peptides based on sequence text mining and public peptide data sources. Shtatland, Timur; Guettler, Daniel; Kossodo, Misha; Pivovarov, Misha; Weissleder, Ralph BMC Bioinformatics 2007 PubMed Link
In vivo imaging of T cell delivery to tumors after adoptive transfer therapy. Pittet, Mikael J; Grimm, Jan; Berger, Cedric R; Tamura, Takahiko; Wojtkiewicz, Gregory; Nahrendorf, Matthias; Romero, Pedro; Swirski, Filip K; Weissleder, Ralph Proc Natl Acad Sci U S A 2007 PubMed Link